[Dock-fans] problem with mol2 files..

Sheng-Hung Wang gentamicin5 at yahoo.com.tw
Thu Jul 14 06:37:33 PDT 2005


Hi,

There are several free programs for converting molecular file format.
For small molecules: PRODRG, BABEL, OpenBabel
For protein(pdb to mol2, pdbq and pdbqs): PMOL2Q


PRODRG web site:
http://davapc1.bioch.dundee.ac.uk/programs/prodrg/prodrg.html

Babel web site:
http://www.eyesopen.com/products/applications/babel.html

OpenBabel web site:
http://openbabel.sourceforge.net/

PMOL2Q web site:
http://home.pchome.com.tw/team/gentamicin/mol/mol.htm

Sincerely,
Sheng-Hung

--- "ravi.k.varanasi" <ravikumarvaranasi at yahoo.co.in>
> 
> hi friends..
> i am new to docking.
> is it must to have a sybyl/base for running dock?
> secondly, i downloded cygwin but i could not work on dock 5.0(windows
> version). 
> can anybody help me in this regard?
>  
> thanks in advance
> ravi varanasi
> 
> 
> 		
> ---------------------------------
>  Free antispam, antivirus and 1GB to save all your messages
>  Only in Yahoo! Mail: http://in.mail.yahoo.com>
_______________________________________________
> Dock-fans mailing list
> Dock-fans at docking.org
> http://blur.compbio.ucsf.edu/mailman/listinfo/dock-fans
> 



	

	
		
女治網路»è©±ä»»ä



More information about the Dock-fans mailing list