[Dock-fans] WARNING shrink_list: No memebers provied

Terry Lang terry at cgl.ucsf.edu
Mon Nov 21 15:16:53 PST 2005

Dear Yuliet,

          Unfortunately, we no longer support DOCK 4, so I cannot help 
you resolve your situation with version 4.  For DOCK 5, I would first 
recommend downloading the newest version 5.3.0.  You can obtain it from 
the same web site where you downloaded 5.2.0.  If you are still having 
problems, you will need to send some more information (ie you input 
files) to help determine the problem.


Yuliet Mazola Reyes wrote:

> Hello:
> I ran *Dock 4.01* and I had problems with a few compounds: Dock 4.01 
> is breaking apart the starting structure and only docking a portion of 
> the ligand. The error reported in the dock.out file was: *WARNING 
> shrink_list: No memebers provied*
> I also ran *Dock 5.2* with the same database and most of  the 
> compounds with this problem using Dock 4.01 *were not docked using 
> Dock 5.2*.
> Can any one tell me what this error means and how I can avoid it?
> Thanks,
>                       Yuliet
> _______________________________________________
> Dock-fans mailing list
> Dock-fans at docking.org
> http://blur.compbio.ucsf.edu/mailman/listinfo/dock-fans

P. Therese Lang
Kuntz and James Labs
UCSF--Chemistry and Chemical Biology
Phone: (415)476-3986


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