[Dock-fans] how to use many flexiDBs in dock.in

Darrell Hurt darrellh at niddk.nih.gov
Wed Oct 26 09:11:57 PDT 2005


Hi everyone,

How do I specify that I want DOCK to use more than one flexiDBs in the 
dock.in file?

This is how I do it for a .mol2 database:

ligand_atom_file   database.mol2


This is how I do it for a .db database:

ligand_atom_file   database.db


But how I do indicate many .db's?

Like this?:

ligand_atom_file   database1.db
ligand_atom_file   database2.db
ligand_atom_file   database3.db

Or like this?:

ligand_atom_file   database1.db database2.db database3.db


Or is it best to just "cat" the .db files?:

ligand_atom_file   database1-3.db


Thanks for your replies,
Darrell



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