[Dock-fans] Error while running sphgen

Senthil Kumar senthilkumar_natesan at bi.iiita.ac.in
Fri May 5 06:51:07 PDT 2006


Dear all,

I am repeatedly coming across the same error while running sphgen in DOCK.

verbal output during dms run:

4671 atoms
        S       24
        O       852
        N       799
        C       2996
Servers initialized
Neighbors computed
Probes computed
Neighbors sent
Surface computed
Server request count:
        localhost       180260
126879 points   (35381 contact, 91498 reentrant)
23490.35 sq. A  (6899.75 contact, 16590.60 reentrant)
5.40 pts/sq.A   (5.13 contact, 5.52 reentrant)

my INSPH file is as follows:

rec.ms
R
X
0.0
4.0
1.4
rec.sph

and I ran with sphgen

# ../../bin/sphgen
fmt: read unexpected character
apparent state: unit 2 named temp2.sph
last format: (2I5,F8.4,I8,4F12.6)
lately reading sequential formatted external IO
Aborted

can anyone pls throw some light on this error message!!!

thanks in advance.


Senthil Kumar Natesan,
M.Tech(IT), Final sem.,
specialization in Bioinformatics,
Indian Institute of Information Technology,
Allahabad, India 211012.





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