[Dock-fans] cygwin: aborted (core dumped)
sfinck187 at yahoo.com
Sat Mar 17 16:04:42 PST 2007
I'm trying to dock folate into DHFR.
My box is as small as the binding site.
When I run DOCK in cygwin, I get this:
Initializing Library File Routines . . .
Initializing Orienting Routines . . .
Initializing Grid Score Routines . . .
Reading the energy grid from smallbox.nrg
Error: memory exhausted!
For Unix platforms increase the datasize, stacksize, and
memoryuse using the limit, ulimit, or unlimit commands.
Aborted (core dumped)
I have the full install of cygwin and I can't find any of these commands. When I ran showbox I didn't add any extra space. I can't make it any smaller. Any ideas?
"It is nice to think that there are so many unsolved puzzles ahead for biology, although I wonder whether we will ever find enough graduate students." Lewis Thomas
Roswell Park Cancer Institute
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