[Dock-fans] verify ligand before dock, please help me !

Scott Brozell sbrozell at scripps.edu
Tue May 22 18:12:24 PDT 2007


Hi,

On Tue, 15 May 2007, Tuan Trieu wrote:

> i'm a novice with respect to docking and i'm trying docking a molecule,
> i created a ligand, but i don't know whether my ligand is enough to docking ?

You need a receptor too.

> i'm using DOCK6,
> can you help to verify my ligand and have any advices for me ?

Read the tutorials:
http://dock.compbio.ucsf.edu/DOCK_6/tutorials/index.htm
and then substitute in your ligand and receptor.

Scott



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