[Dock-fans] Problem in sphgen

Scott Brozell sbrozell at scripps.edu
Fri Apr 4 14:17:29 PDT 2008


Hi,

On Fri, 4 Apr 2008, bishal singh wrote:

>  I am getting problem in sphgen. It's unable to read temp2.sph file after
> 99999 surface points and showing following error in OUTSPH file.
> 
> " density type =X
>  reading tryr_H.ms
> # of atoms =7399  # of surf pts = *****
> finding sphere for tryr_H.ms
> dotlim = 0.0000
> radmax = 4.0000
> Minimum radius of acceptable spheres?
>  1.399999998
> output to tryr_H.sph
> error reading temp2.sph
>   0  81  1.4865   0.309575  46.673946  83.545639  22.252825"

Go to:
http://dock.compbio.ucsf.edu/DOCK_6/index.htm
enter into the search box:
error reading temp2.sph
Find bunches of workarounds:
http://blur.compbio.ucsf.edu/pipermail/dock-fans/2007-October/001260.html
http://shoichetlab.compbio.ucsf.edu/pipermail/dock-fans/2006-December/000814.html
http://shoichetlab.compbio.ucsf.edu/pipermail/dock-fans/2005-September/000374.html

Scott




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