[Dock-fans] Dock 6.2 Installation

Imtiaz M. biobrain at gmail.com
Fri Aug 29 03:00:03 PDT 2008


Dear Sir,

I am trying to install Dock 6.2 on SuSE 11.0 installed on (ACER Aspire 5630)
and getting different errors as shown below.

Kindly provide me the relevant information/guidance to sort this issue.


imtiaz:/home/imtiaz/bin/dock6/install # make all
Starting installation of
DOCK v6.2
at Fri Aug 29 09:45:22 BST 2008.

cd ../src && make install
make[1]: Entering directory `/home/imtiaz/bin/dock6/src'
cd dock && make install
make[2]: Entering directory `/home/imtiaz/bin/dock6/src/dock'
g++ -c  -O2 -o amber_typer.o  amber_typer.cpp
amber_typer.cpp: In function 'char* white_line(char*)':
amber_typer.cpp:15: error: 'strlen' was not declared in this scope
amber_typer.cpp: In function 'int assign_node(ATOM_TYPE_NODE&, int)':
amber_typer.cpp:66: error: 'strtok' was not declared in this scope
amber_typer.cpp:66: error: 'strcpy' was not declared in this scope
amber_typer.cpp:87: error: 'strncmp' was not declared in this scope
amber_typer.cpp: In function 'int check_type(const char*, const char*)':
amber_typer.cpp:125: error: 'strstr' was not declared in this scope
amber_typer.cpp: In constructor 'ATOM_TYPE::ATOM_TYPE()':
amber_typer.cpp:251: error: 'INT_MIN' was not declared in this scope
amber_typer.cpp: In member function 'void
ATOM_TYPER::get_vdw_labels(std::string, bool)':
amber_typer.cpp:285: error: 'strncmp' was not declared in this scope
amber_typer.cpp:346: error: 'strtok' was not declared in this scope
amber_typer.cpp:382: error: 'INT_MIN' was not declared in this scope
amber_typer.cpp:387: error: 'INT_MIN' was not declared in this scope
amber_typer.cpp: In member function 'int
ATOM_TYPER::assign_vdw_labels(DOCKMol&, int)':
amber_typer.cpp:475: error: 'strcmp' was not declared in this scope
amber_typer.cpp: In member function 'void
BOND_TYPER::get_flex_labels(std::string)':
amber_typer.cpp:531: error: 'strncmp' was not declared in this scope
amber_typer.cpp:544: error: 'strlen' was not declared in this scope
amber_typer.cpp:561: error: 'strtok' was not declared in this scope
amber_typer.cpp: In member function 'void
BOND_TYPER::get_flex_search(std::string)':
amber_typer.cpp:598: error: 'strtok' was not declared in this scope
amber_typer.cpp:600: error: 'strcmp' was not declared in this scope
amber_typer.cpp: In member function 'void
CHEM_TYPER::get_chem_labels(std::string)':
amber_typer.cpp:753: error: 'strncmp' was not declared in this scope
amber_typer.cpp:762: error: 'strtok' was not declared in this scope
make[2]: *** [amber_typer.o] Error 1
make[2]: Leaving directory `/home/imtiaz/bin/dock6/src/dock'
make[1]: *** [dock6] Error 2
make[1]: Leaving directory `/home/imtiaz/bin/dock6/src'
make: *** [install] Error 2



With Regards
Imtiaz
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