[Dock-fans] Ref to Dock6.2

Scott Brozell sbrozell at scripps.edu
Mon Jun 23 23:19:30 PDT 2008


Hi,

Yes, use the DOCK 5 paper:
http://dock.compbio.ucsf.edu/DOCK_6/dock6_manual.htm#Moustakasetal2006
and
P.T. Lang, D. Moustakas, S. Brozell, N. Carrascal, S. Mukherjee, S.
Pegg, K. Raha, D.  Shivakumar, R. Rizzo, D. Case, B. Shoichet, I.
Kuntz. DOCK, Version 6.2 (2008), University of California, San
Francisco, USA
and if you use Amber Score, cite this:
Alan P. Graves, Devleena M. Shivakumar,  Sarah E. Boyce,  Matthew P. Jacobson, David A. Case, and Brian K. Shoichet,
J. Mol. Biol. 377, 914-934 (2008).
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WK7-4RPTJ98-2&_user=10&_coverDate=03%2F28%2F2008&_alid=719324951&_rdoc=1&_fmt=summary&_orig=search&_cdi=6899&_sort=d&_docanchor=&view=c&_ct=1&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=17a52a47a25a755a0c3311d436ac53af

Scott

ps 6.1:
http://blur.compbio.ucsf.edu/pipermail/dock-fans/2008-February/001386.html

On Thu, 19 Jun 2008, Francesco Pietra wrote:

> Is the following reference (which I used for version 6.1, year 2007)
> correct for Dock6.2?
> 
> P.T. Lang, D. Moustakas, S. Brozell, N. Carrascal, S. Mukherjee, S.
> Pegg, K. Raha, D.  Shivakumar, R. Rizzo, D. Case, B. Shoichet, I.
> Kuntz. DOCK, Version 6.2 (2008), University of California, San
> Francisco, USA



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