[Dock-fans] (no subject)

inderjit yadav inderjitbioinfo at gmail.com
Fri Jun 27 23:56:08 PDT 2008


im installing dock on rocks cluster  .when making the make dock command
.would u please help me i m new to dock

Inderjit Singh


program dock at Mon Jun 30 02:57:48 IST 2008.

cd ../src/dock && make install
make[1]: Entering directory `/home/inder/dock6/src/dock'
cd nab && make all
make[2]: Entering directory `/home/inder/dock6/src/dock/nab'
ar rv nab.a molio.o prm.o sff.o traceback.o select_atoms.o memutil.o
reslib.o jacobi.o molutil.o chirvol.o regexp.o binpos.o time.o rand2.o
conjgrad.o database.o tleap.o
r - molio.o
r - prm.o
r - sff.o
r - traceback.o
r - select_atoms.o
r - memutil.o
r - reslib.o
r - jacobi.o
r - molutil.o
r - chirvol.o
r - regexp.o
r - binpos.o
r - time.o
r - rand2.o
r - conjgrad.o
r - database.o
r - tleap.o
ranlib nab.a
make[2]: Leaving directory `/home/inder/dock6/src/dock/nab'
-O2 -o dock6.mpi amber_typer.o base_grid.o base_mpi.o base_score.o
conf_gen.o dock.o dockmol.o grid.o library_file.o master_score.o orient.o
score.o simplex.o sphere.o score_solvent.o score_amber.o sasa.o
score_chemgrid.o utils.o trace.o nab/nab.a -lm
make[1]: DBUILD_DOCK_WITH_MPI: Command not found
make[1]: [dock6.mpi] Error 127 (ignored)
mv dock6.mpi ../../bin
mv: cannot stat `dock6.mpi': No such file or directory
make[1]: *** [install] Error 1
make[1]: Leaving directory `/home/inder/dock6/src/dock'
make: *** [dock] Error 2
[root at bifhpc install]#
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