[Dock-fans] dock 6.2 install

Scott Brozell sbrozell at rci.rutgers.edu
Mon Jul 13 08:58:13 PDT 2009


Hi,

On Sun, Jul 12, 2009 at 05:27:02PM +0800, 宋云峰 wrote:
> 
> I am a freshman of dock. When I was installing the dock to my computer, how to select the parameters after ./configure. What the difference of "gnu" and "sgi"? If my cpu is doubel cores, should I choose the "gnu.parallel" or "sgi.parallel"?
> 

http://dock.compbio.ucsf.edu/DOCK_6/dock6_manual.htm#Installation
gnu  	is a gnu-style compiler
sgi  	is a sgi-style compiler
It is probable that gnu is apt for you.
No, the difference between 1 and 2 processors dock runs is usually
not significant:
http://dock.compbio.ucsf.edu/DOCK_6/dock6_manual.htm#ParallelProcessing

Scott



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