[Dock-fans] problem with parser generator

Davide Mercadante dmer018 at aucklanduni.ac.nz
Thu Jun 4 06:32:43 PDT 2009


Dear all,

I have a problem during the installation of DOCK 6.2. I got the following
error in the parser generation step:

gcc -c -O2 -DSYSV parser.c
btyaccpa.ske:111: error: expected specifier-qualifier-list before
‘yyparsestate’
btyaccpa.ske:128: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’
before ‘*’ token
btyaccpa.ske:131: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’
before ‘*’ token
btyaccpa.ske:180: error: expected ‘)’ before ‘*’ token
btyaccpa.ske:181: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’
before ‘*’ token
btyaccpa.ske:182: error: expected ‘)’ before ‘*’ token
btyaccpa.ske: In function ‘yyparse’:
btyaccpa.ske:193: error: ‘yyparsestate’ undeclared (first use in this
function)
btyaccpa.ske:193: error: (Each undeclared identifier is reported only once
btyaccpa.ske:193: error: for each function it appears in.)
btyaccpa.ske:193: error: ‘yyerrctx’ undeclared (first use in this function)
btyaccpa.ske:206: error: ‘yyps’ undeclared (first use in this function)
btyaccpa.ske:257: error: ‘yypath’ undeclared (first use in this function)
btyaccpa.ske:265: error: ‘save’ undeclared (first use in this function)
btyaccpa.ske:309: error: ‘new’ undeclared (first use in this function)
btyaccpa.ske:309: error: expected ‘;’ before ‘Yshort’
btyaccpa.ske:310: error: expected ‘;’ before ‘YYSTYPEt’
btyaccpa.ske:312: error: expected ‘;’ before ‘int’
btyaccpa.ske: In function ‘YYLex1’:
btyaccpa.ske:739: error: ‘yyps’ undeclared (first use in this function)
btyaccpa.ske: In function ‘yyexpand’:
btyaccpa.ske:762: error: ‘new’ undeclared (first use in this function)
btyaccpa.ske:762: error: expected ‘;’ before ‘YYSTYPEt’
btyaccpa.ske:763: error: expected ‘;’ before ‘int’
btyaccpa.ske:764: error: expected ‘;’ before ‘Yshort’
btyaccpa.ske:768: error: ‘delete’ undeclared (first use in this function)
btyaccpa.ske:768: error: expected expression before ‘]’ token
btyaccpa.ske:769: error: expected expression before ‘]’ token
btyaccpa.ske:770: error: expected expression before ‘]’ token
btyaccpa.ske: At top level:
btyaccpa.ske:794: error: expected ‘)’ before ‘*’ token
btyaccpa.ske:814: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’
before ‘*’ token
btyaccpa.ske:825: error: expected ‘)’ before ‘*’ token
make[2]: *** [parser.o] Errore 1
make[2]: uscita dalla directory «/home/dmer018/Scrivania/dock6/src/tleap»
make[1]: *** [utils] Errore 2
make[1]: uscita dalla directory «/home/dmer018/Scrivania/dock6/src»
make: *** [install] Errore 2

is the same error already reported in dock-fans mailing list here:

http://blur.compbio.ucsf.edu/pipermail/dock-fans/2009-February/001822.html



Please, can anyone help me to solve this problem?

Thank you infinitely in advance.

Cheers,
Davide

Davide Mercadante - PhD Student -
Department of Chemistry
The University of Auckland
Rm 438 ext. 89171
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