[Dock-fans] grid problem

Scott Brozell sbrozell at rci.rutgers.edu
Wed Nov 11 18:31:11 PST 2009


Hi,

On Tue, Nov 10, 2009 at 02:35:11PM -0500, David Taylor wrote:
> A couple of quick questions:
> 
> 1) Do you know where I can find an interpretation of the grid score, vdw,
> etc? I have the answer now, I just don't know what it means. I've looked in
> the DOCK guide and I really didn't found anything that helps me out a lot...

http://dock.compbio.ucsf.edu/DOCK_6/faq.htm#whatisascore
http://dock.compbio.ucsf.edu/DOCK_6/dock6_manual.htm#GridEnergyScoring

> 2) How did you get the pictures of the molecule? Did you just snag them off
> the internet or did you take a screenshot of Chimera or what?

It is quite cpmmon to take screenshots of Chimera.

Scott


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