[Dock-fans] Docking in presence of FAD and NADH

Sudipto Mukherjee sudmukh at yahoo.com
Mon Apr 11 07:10:35 PDT 2011


Dear Monisha.

You can do docking in the prescence of co-factors. They needs to be modeled as 
part of the receptor. The Dock Prep tool in chimera handles cofactors 
automatically, and will create a protonated receptor mol2 you can create a grid 
with. 


Regards
Sudipto





________________________________
From: Monisha Hajra <hajra.monisha at gmail.com>
To: dock-fans at mailman.docking.org
Sent: Sun, April 10, 2011 4:38:27 PM
Subject: [Dock-fans] Docking in presence of FAD and NADH

Hi Team,

Can you tell me how should I do docking in presence of FAD and NADP.

Will really appreciate any help.

Regards
Monisha 
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