[Dock-fans] How to dock in protein which doesn't have reference internal ligand
sbrozell at rci.rutgers.edu
Tue Jul 19 11:18:01 PDT 2011
On Tue, Jul 19, 2011 at 08:48:06PM +0530, diya singh wrote:
> I have learned the basics of DOCK6. I am trying to figure out how should I
> go ahead in docking procedure if my PDB protein doesn't have internal
> ligand. When I tried using my external molecule as ligand. Sphgen command
> results 0 spheres.
> How should I dock in such kind of protein.
If you are referring to blind docking then search the list for it:
Here are some good hits:
More information about the Dock-fans