[Dock-fans] DOCK 6 Download Password Reissued

John Irwin jir322 at gmail.com
Tue Jun 26 06:33:34 PDT 2012


forwarding to the list

On Tue, Jun 26, 2012 at 3:35 AM, Fabian Glaser <fglaser at technion.ac.il>wrote:

> Hi,
>
> I cannot compile grid on my Mac OSX, I tried both g77 and gfortran and the
> problems seems to be related to the architecture. Can grid be compiled into
> a 64 OSX machine?
>
> Here is the output I got:
>
>
> g77  -O2 -fno-automatic -fno-second-underscore grid.o score.o score_grid.o
> gridpoint.o define.o io.o io_grid.o io_gridf.o mol_prep.o io_receptor.o
> io_mol2.o io_pdb.o io_ptr.o io_sph.o label.o label_node.o label_chem.o
> label_vdw.o label_flex.o mol.o search.o transform.o transformf.o parm.o
> parm_grid.o rotrans.o utility.o vector.o -lm -lpthread -o grid \
>
> ld: warning: -macosx_version_min not specificed, assuming 10.7
> ld: warning: ignoring file grid.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file score.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file score_grid.o, file was built for unsupported
> file format which is not the architecture being linked (i386)
> ld: warning: ignoring file define.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file io.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file io_grid.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file mol_prep.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file io_receptor.o, file was built for unsupported
> file format which is not the architecture being linked (i386)
> ld: warning: ignoring file io_mol2.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file io_pdb.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file io_ptr.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file io_sph.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file label.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file label_node.o, file was built for unsupported
> file format which is not the architecture being linked (i386)
> ld: warning: ignoring file label_chem.o, file was built for unsupported
> file format which is not the architecture being linked (i386)
> ld: warning: ignoring file label_vdw.o, file was built for unsupported
> file format which is not the architecture being linked (i386)
> ld: warning: ignoring file label_flex.o, file was built for unsupported
> file format which is not the architecture being linked (i386)
> ld: warning: ignoring file mol.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file search.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file transform.o, file was built for unsupported
> file format which is not the architecture being linked (i386)
> ld: warning: ignoring file parm.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file parm_grid.o, file was built for unsupported
> file format which is not the architecture being linked (i386)
> ld: warning: ignoring file rotrans.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file utility.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> ld: warning: ignoring file vector.o, file was built for unsupported file
> format which is not the architecture being linked (i386)
> Undefined symbols for architecture i386:
>  "_MAIN__", referenced from:
>      _main in libfrtbegin.a(frtbegin.o)
> ld: symbol(s) not found for architecture i386
> collect2: ld returned 1 exit status
> make: *** [grid] Error 1
>
>
> Thanks!!
>
> Fabian
> ______________________________
> Fabian Glaser, PhD
> Bioinformatics Knowledge Unit,
> The Lorry I. Lokey Interdisciplinary
> Center for Life Sciences and Engineering
> Technion - Israel Institute of Technology
> Haifa 32000, ISRAEL
> E-mail: fglaser at technion.ac.il
> Tel:    +972-4-8293701
> Fax:   +972-4-8225153
>
> On Jun 25, 2012, at 7:29 PM, dock_license at dock.compbio.ucsf.edu wrote:
>
> > Dear DOCK User,
> >
> >  You have been issued another DOCK 6 password.  Please go to the
> following link
> > for downloading instructions.
> >
> > https://dock.compbio.ucsf.edu/retrieve_dock_distribution.html
> >
> >       Login: fglaser at technion.ac.il
> >       Password: vmQtFMkjdGfwCyd
> >
> > You will be given FIVE opportunities to download DOCK, after which the
> > password will expire.  If you need additional access to the software,
> please
> > contact the license administrator at dock_license at dock.compbio.ucsf.edu.
> >
> > Sincerely,
> >
> > The DOCK Team
>
>
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