[Dock-fans] regarding the DOCK6

Bindumadhuri Cavuturu madhu27koushik at gmail.com
Tue Nov 3 22:51:14 PST 2015


I have a question regarding my dock6 analysis. In the dock.out file it was
given the amberscore ,protein energy and the liand and for the complex as
well. I have done it for the wild type and the mutant forms as well. now I
want to calculate the DELTA DELTA G value but Iam confused to which value
should I consider wheather AMBER score or the energy values for the complex
,receptor and the ligand. Kindly suggest me to rectify the doubt and to get
clarified



Thanking you


sincerely,


C.Bindumadhuri
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