[Dock-fans] Dock 6.7 Test errors

RKH Liyanage rkhliyanage at gmail.com
Wed Apr 19 12:52:44 PDT 2017


Hi

I'm new to dock 6.
I installed dock 6.7 on Linux mint 18
Installation went fine.
When I ran tests as per dock manual most of the tests passed except for the
errors given below which showed up at the end of the test.

I have given a link below to installation and test terminal details.

https://docs.google.com/document/d/1OIyHaHZV2Ic_8YrqFRoVjkLV
W6Gf6lRHOGpVExAfr0s/view



*Are these errors significant??*
*If it is what should I do to fix the errors before I start my project. *


*ERRORS*

==============================================================

diffing orientrigidcontactprimaryzou_gbsasecondarymulti_secondary_scored.mol2.save
with orientrigidcontactprimaryzou_gbsasecondarymulti_secondary_scored.mol2

PASSED

==============================================================

make[2]: Leaving directory '/home/rdx12/Downloads/dock6/dock6
Apr/install/test/zou_gbsa_score'

cd amber_score_181l && make test

make[2]: Entering directory '/home/rdx12/Downloads/dock6/dock6
Apr/install/test/amber_score_181l'

../../../bin/prepare_amber.pl lig.mol2 181l.pdb

Error from amberize_receptor; examine amberize_receptor.out

../default_targets.h:18: recipe for target 'amberize' failed

make[2]: *** [amberize] Error 25

make[2]: Leaving directory '/home/rdx12/Downloads/dock6/dock6
Apr/install/test/amber_score_181l'

Makefile:43: recipe for target 'amberdock' failed

make[1]: *** [amberdock] Error 2

make[1]: Leaving directory '/home/rdx12/Downloads/dock6/dock6
Apr/install/test'

Makefile:79: recipe for target 'timed_test' failed

make: *** [timed_test] Error 2

rdx12 at Inspiron3521 ~/Downloads/dock6/dock6 Apr/install/test $

*Thank you in advance*

*Regards! *
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